Xiao-Le Deng

DeepVariant

2019-10-09 10:00
#Bio

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

1. Introduction

2. GitHub

3. Download

4. Reference

  • Wenger, A. M., et al. (2019). Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome. Nature biotechnology, 1-8. doi: 10.1038/s41587-019-0217-9
  • Poplin, R., et al. (2018). A universal SNP and small-indel variant caller using deep neural networks. Nature biotechnology, 36(10), 983. doi: 10.1038/nbt.4235